Difference between revisions of "OJ Break v2 Search Reference"

From xBio:D Wiki
Jump to navigation Jump to search
(→‎Search Data Type Glossary)
Line 31: Line 31:
  
 
===== Return =====
 
===== Return =====
−
* [[#SearchReturnComplete_.28extends_SearchReturn.29|SearchReturnComplete]]
+
* [[#SearchReturnComplete (extends SearchReturn)|SearchReturnComplete]]
  
 
===== Example =====
 
===== Example =====
Line 49: Line 49:
 
* ''version'': number
 
* ''version'': number
 
===== Return =====
 
===== Return =====
−
* [[#SearchReturnTaxa_.28extends_SearchReturn.29|SearchReturnTaxa]]
+
* [[#SearchReturnTaxa (extends SearchReturn)|SearchReturnTaxa]]
  
 
===== Example =====
 
===== Example =====
Line 67: Line 67:
 
* ''version'': number
 
* ''version'': number
 
===== Return =====
 
===== Return =====
−
* [[#SearchReturnOccurrences_.28extends_SearchReturn.29|SearchReturnOccurrences]]
+
* [[#SearchReturnOccurrences (extends SearchReturn)|SearchReturnOccurrences]]
  
 
===== Example =====
 
===== Example =====
Line 86: Line 86:
 
* ''version'': number
 
* ''version'': number
 
===== Return =====
 
===== Return =====
−
* [[#SearchReturnAgents_.28extends_SearchReturn.29|SearchReturnAgents]]
+
* [[#SearchReturnAgents (extends SearchReturn)|SearchReturnAgents]]
  
 
===== Example =====
 
===== Example =====
Line 103: Line 103:
 
* ''version'': number
 
* ''version'': number
 
===== Return =====
 
===== Return =====
−
* [[#SearchReturnInstitutions_.28extends_SearchReturn.29|SearchReturnInstitutions]]
+
* [[#SearchReturnInstitutions (extends SearchReturn)|SearchReturnInstitutions]]
  
 
===== Example =====
 
===== Example =====
Line 120: Line 120:
 
* ''version'': number
 
* ''version'': number
 
===== Return =====
 
===== Return =====
−
* [[#SearchReturnJournal_.28extends_SearchReturn.29|SearchReturnJournal]]
+
* [[#SearchReturnJournal (extends SearchReturn)|SearchReturnJournal]]
  
 
===== Example =====
 
===== Example =====
Line 138: Line 138:
 
* ''version'': number
 
* ''version'': number
 
===== Return =====
 
===== Return =====
−
* [[#SearchReturnPlaces_.28extends_SearchReturn.29|SearchReturnPlaces]]
+
* [[#SearchReturnPlaces (extends SearchReturn)|SearchReturnPlaces]]
 
===== Example =====
 
===== Example =====
 
http://osuc.biosci.ohio-state.edu/OJ_Break/getPlacesFromText?search=Sri+Lanka&limit=30&format=json&key=FBF57A9F7A666FC0E0430100007F0CDC&version=2
 
http://osuc.biosci.ohio-state.edu/OJ_Break/getPlacesFromText?search=Sri+Lanka&limit=30&format=json&key=FBF57A9F7A666FC0E0430100007F0CDC&version=2
Line 155: Line 155:
 
* ''version'': number
 
* ''version'': number
 
===== Return =====
 
===== Return =====
−
* [[#SearchReturnLocalities_.28extends_SearchReturn.29|SearchReturnLocalities]]
+
* [[#SearchReturnLocalities (extends SearchReturn)|SearchReturnLocalities]]
  
 
===== Example =====
 
===== Example =====
Line 166: Line 166:
  
 
==== SearchReturnComplete (extends [[#SearchReturn|SearchReturn]]) ====
 
==== SearchReturnComplete (extends [[#SearchReturn|SearchReturn]]) ====
−
* ''taxon_results'': [[#SearchReturnTaxa_.28extends_SearchReturn.29|SearchReturnTaxa]] [0..1]
+
* ''taxon_results'': [[#SearchReturnTaxa (extends SearchReturn)|SearchReturnTaxa]] [0..1]
−
* ''occurrence_results'': [[#SearchReturnOccurrences_.28extends_SearchReturn.29|SearchReturnOccurrences]] [0..1]
+
* ''occurrence_results'': [[#SearchReturnOccurrences (extends SearchReturn)|SearchReturnOccurrences]] [0..1]
−
* ''agent_results'': [[#SearchReturnAgents_.28extends_SearchReturn.29|SearchReturnAgents]] [0..1]
+
* ''agent_results'': [[#SearchReturnAgents (extends SearchReturn)|SearchReturnAgents]] [0..1]
−
* ''institution_results'': [[#SearchReturnInstitutions_.28extends_SearchReturn.29|SearchReturnInstitutions]] [0..1]
+
* ''institution_results'': [[#SearchReturnInstitutions (extends SearchReturn)|SearchReturnInstitutions]] [0..1]
−
* ''journal_results'': [[#SearchReturnJournals_.28extends_SearchReturn.29|SearchReturnJournals]] [0..1]
+
* ''journal_results'': [[#SearchReturnJournals (extends SearchReturn)|SearchReturnJournals]] [0..1]
−
* ''locality_results'': [[#SearchReturnLocalities_.28extends_SearchReturn.29|SearchReturnLocalities]] [0..1]
+
* ''locality_results'': [[#SearchReturnLocalities (extends SearchReturn)|SearchReturnLocalities]] [0..1]
−
* ''place_results'': [[#SearchReturnPlaces_.28extends_SearchReturn.29|SearchReturnPlaces]] [0..1]
+
* ''place_results'': [[#SearchReturnPlaces (extends SearchReturn)|SearchReturnPlaces]] [0..1]
  
 
==== SearchReturnAgents (extends [[#SearchReturn|SearchReturn]]) ====
 
==== SearchReturnAgents (extends [[#SearchReturn|SearchReturn]]) ====

Revision as of 19:46, 20 April 2015

Introduction

OJ_Break is the name of the xBio:D RESTful API service to facilitate discovery of data within the xBio:D database. The API can respond with JavaScript Object Notation (JSON), XML, or JSON with padding (JSONP) and accepts HTTP GET and POST requests indiscriminately. The backend of the API is written in Oracle's PL/SQL database language, which is fast but often inflexible, while a Python presentation layer mitigates request handling and authentication.

OJ_Break Version 2 is a new and improved edition of the work started in Version 1. Version 2 introduces a completely restructured and standardized data model to further enhance the functionality of the xBio:D database.

API Information and Access

This page specifies the methods and data defined by OJ_Break Version 2, more precisely those that are defined by the Search data domain. To get information on any of the other data domains defined in OJ_Break Version 2, visit the See also section.

Using the OJ_Break Version 2 API requires calling methods with corresponding, method specific parameters (found on this page) and a few other required parameters. These required parameters include specifying a return format, an API access key, and a version number. 

   Example: http://osuc.biosci.ohio-state.edu/OJ_Break/getSearchResults?search=Heptascelio&categories=taxon,occurrence&format=json&key=FBF57A9F7A666FC0E0430100007F0CDC&version=2

Notice the specification of the version parameter at the end of the example method call. With the introduction of OJ_Break Version 2, the version parameter has a default value of 2 making the specification in the example unnecessary. To read more about using the OJ_Break Version 2 API, go to OJ_Break API Access.

Procedural Reference

Search

getSearchResults

Description
Parameters
  • search: string
  • *domains: array of domain
  • *basic_only: Boolean_flag
  • *limit: number
  • *offset: number
  • *case_sensative: Boolean_flag
  • *inst_id: inst_id
  • format: string
  • key: string
  • version: number
Return
Example

http://osuc.biosci.ohio-state.edu/OJ_Break/getSearchResults?search=Heptascelio&categories=taxon,occurrence&format=json&key=FBF57A9F7A666FC0E0430100007F0CDC&version=2

getTaxaFromText

Description
Parameters
  • search: string
  • *basic_only: Boolean_flag
  • *limit: number
  • *offset: number
  • *case_sensative: Boolean_flag
  • *inst_id: inst_id
  • format: string
  • key: string
  • version: number
Return
Example

http://osuc.biosci.ohio-state.edu/OJ_Break/getTaxaFromText?search=Heptascelio&limit=30&format=json&key=FBF57A9F7A666FC0E0430100007F0CDC&version=2

getOccurrencesFromText

Description
Parameters
  • search: string
  • *basic_only: Boolean_flag
  • *limit: number
  • *offset: number
  • *case_sensative: Boolean_flag
  • *inst_id: inst_id
  • format: string
  • key: string
  • version: number
Return
Example

http://osuc.biosci.ohio-state.edu/OJ_Break/getOccurrencesFromText?search=Heptascelio&limit=30&format=json&key=FBF57A9F7A666FC0E0430100007F0CDC&version=2

getAgentsFromText

Description
Parameters
  • search: string
  • *include_party: Boolean_flag
  • *basic_only: Boolean_flag
  • *limit: number
  • *offset: number
  • *case_sensative: Boolean_flag
  • *inst_id: inst_id
  • format: string
  • key: string
  • version: number
Return
Example

http://osuc.biosci.ohio-state.edu/OJ_Break/getAgentsFromText?search=Johnson&limit=30&format=json&key=FBF57A9F7A666FC0E0430100007F0CDC&version=2

getInstitutionsFromText

Description
Parameters
  • search: string
  • *basic_only: Boolean_flag
  • *limit: number
  • *offset: number
  • *case_sensative: Boolean_flag
  • format: string
  • key: string
  • version: number
Return
Example

http://osuc.biosci.ohio-state.edu/OJ_Break/getInstitutionsFromText?search=OSUC&limit=30&format=json&key=FBF57A9F7A666FC0E0430100007F0CDC&version=2

getJournalsFromText

Description
Parameters
  • search: string
  • *basic_only: Boolean_flag
  • *limit: number
  • *offset: number
  • *case_sensative: Boolean_flag
  • format: string
  • key: string
  • version: number
Return
Example

http://osuc.biosci.ohio-state.edu/OJ_Break/getJournalFromText?search=Insect&limit=30&format=json&key=FBF57A9F7A666FC0E0430100007F0CDC&version=2

getPlacesFromText

Description
Parameters
  • search: string
  • *basic_only: Boolean_flag
  • *limit: number
  • *offset: number
  • *case_sensative: Boolean_flag
  • *inst_id: inst_id
  • format: string
  • key: string
  • version: number
Return
Example

http://osuc.biosci.ohio-state.edu/OJ_Break/getPlacesFromText?search=Sri+Lanka&limit=30&format=json&key=FBF57A9F7A666FC0E0430100007F0CDC&version=2

getLocalitiesFromText

Description
Parameters
  • search: string
  • *basic_only: Boolean_flag
  • *limit: number
  • *offset: number
  • *case_sensative: Boolean_flag
  • *inst_id: inst_id
  • format: string
  • key: string
  • version: number
Return
Example

http://osuc.biosci.ohio-state.edu/OJ_Break/getLocalitiesFromText?search=Sri+Lanka&limit=30&format=json&key=FBF57A9F7A666FC0E0430100007F0CDC&version=2

Search Data Type Glossary

Classes

SearchReturn

  • count: Number

SearchReturnComplete (extends SearchReturn)

SearchReturnAgents (extends SearchReturn)

SearchReturnInstitutions (extends SearchReturn)

SearchReturnJournals (extends SearchReturn)

SearchReturnLocalities (extends SearchReturn)

SearchReturnOccurrences (extends SearchReturn)

SearchReturnPlaces (extends SearchReturn)

SearchReturnTaxa (extends SearchReturn)

See also

Visit any of the below links to find information about the other data domains defined by OJ_Break Version 2.

Retrieved from "https://xbiod.osu.edu/index.php?title=OJ_Break_v2_Search_Reference&oldid=1977"